hi-c topic

Genome scaffolding based on HiC data in heterozygous and high ploidy genomes

tanghaibao

Accurate and flexible loops calling tool for 3D genomic data.

YaqiangCao

A cool place to store your Hi-C

open2c

A collection of tools for Hi-C data analysis

mdozmorov

Customizable workflows based on snakemake and python for the analysis of NGS data

maxplanck-ie

A One-Click System for Analyzing Loop-Resolution Hi-C Experiments

aidenlab

Fast, flexible and extensible genome browser.

higlass

Workshop on measuring, analyzing, and visualizing the 3D genome with Hi-C data.

hms-dbmi

TADbit is a complete Python library to deal with all steps to analyze, model and explore 3C-based data. With TADbit the user can map FASTQ files to obtain raw interaction binned matrices (Hi-C like ma...

3DGenomes

TAD calling, phase imputation, 3D modeling and more for diploid single-cell Hi-C (Dip-C) and general Hi-C

lh3