genome-assembly topic

Genome scaffolding based on HiC data in heterozygous and high ploidy genomes

tanghaibao

Master Algorithmic Programming Techniques. Learn algorithms through programming and advance your software engineering or data science career

TheGeekiestOne

Tools for fast and flexible genome assembly scaffolding and improvement

malonge

LTR_retriever is a highly accurate and sensitive program for identification of LTR retrotransposons; The LTR Assembly Index (LAI) is also included in this package.

oushujun

Viral genomics analysis pipelines

broadinstitute

Modular command-line solution for visualisation, quality control and taxonomic partitioning of genome datasets

DRL

De novo genome assembly and multisample variant calling

mcveanlab

Ultra-fast and memory-efficient (meta-)genome assembler

voutcn

Fast and accurate de novo assembler for long reads

Nextomics

RaGOO is no longer supported. Please use RagTag instead: https://github.com/malonge/RagTag

malonge