Haibao Tang
allhic
Genome scaffolding based on HiC data in heterozygous and high ploidy genomes
bio-pipeline
My collection of light bioinformatics analysis pipelines for specific tasks
goatools
Python library to handle Gene Ontology (GO) terms
jcvi
Python library to facilitate genome assembly, annotation, and comparative genomics
mcscan
Command-line program to wrap dagchainer and combine pairwise results into multi-alignments in column format
quota-alignment
Guided synteny alignment between duplicated genomes (within specified quota constraint)
treecut
Find nodes in hierarchical clustering that are statistically significant
trimReads
Utility programs to trim or sort Illumina reads with adapter sequences