Open Chromosome Collective
Results
9
repositories owned by
Open Chromosome Collective
cooler
191
Stars
53
Forks
Watchers
A cool place to store your Hi-C
distiller-nf
81
Stars
25
Forks
Watchers
A modular Hi-C mapping pipeline
bioframe
169
Stars
26
Forks
Watchers
Genomic interval operations on Pandas DataFrames
coolpuppy
77
Stars
12
Forks
Watchers
A versatile tool to perform pile-up analysis on Hi-C data in .cool format.
pairtools
98
Stars
32
Forks
Watchers
Extract 3D contacts (.pairs) from sequencing alignments
polychrom
45
Stars
16
Forks
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Chromosome polymer simulations and in silico capture experiments
quaich
21
Stars
6
Forks
Watchers
snakemake pipeline for Hi-C post-processing