contact-matrix topic
List
contact-matrix repositories
cooler
191
Stars
53
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A cool place to store your Hi-C
HiCPeaks
39
Stars
9
Forks
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A Python implementation for BH-FDR and HiCCUPS
TADLib
39
Stars
11
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A Library to Explore Chromatin Interaction Patterns for Topologically Associating Domains
genomedisco
25
Stars
10
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Software for comparing contact maps from HiC, CaptureC and other 3D genome data.
coolpuppy
72
Stars
12
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A versatile tool to perform pile-up analysis on Hi-C data in .cool format.
StripeCaller
16
Stars
2
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A toolkit for analyzing architectural stripes