contigs topic

Genome scaffolding based on HiC data in heterozygous and high ploidy genomes

tanghaibao

:mag_right: :pill: Mass screening of contigs for antimicrobial and virulence genes

tseemann

De novo genome assembly and multisample variant calling

mcveanlab

Genome assembly evaluation tool

ablab

An efficient index for the colored, compacted, de Bruijn graph

COMBINE-lab

Identification & characterization of bacterial plasmid-borne contigs from short-read draft assemblies.

oschwengers

Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.

Gabaldonlab

Software for prediction of plasmid sequences in metagenomic assemblies

smaegol

✨🧬 Refined binning of metagenomic contigs using assembly graphs

metagentools

Scalable long read self-correction and assembly polishing with multiple sequence alignment

morispi