genome-scaffolding topic
List
genome-scaffolding repositories
allhic
57
Stars
12
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Genome scaffolding based on HiC data in heterozygous and high ploidy genomes
RaGOO
167
Stars
28
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RaGOO is no longer supported. Please use RagTag instead: https://github.com/malonge/RagTag
CAMSA
24
Stars
4
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CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies
SSAKE
24
Stars
11
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🍶 Genome assembly with short sequence reads
tigmint
54
Stars
13
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⛓ Correct misassemblies using linked AND long reads
physlr
15
Stars
7
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:chains: Construct a Physical Map from Linked Reads
downpore
31
Stars
0
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Suite of tools for use in genome assembly and consensus. Work in progress.