nanopore-sequencing topic
List
nanopore-sequencing repositories
NanoSim
215
Stars
51
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Nanopore sequence read simulator
xpore
128
Stars
22
Forks
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Identification of differential RNA modifications from nanopore direct RNA sequencing
taiyaki
112
Stars
40
Forks
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Training models for basecalling Oxford Nanopore reads
mag
183
Stars
98
Forks
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Assembly and binning of metagenomes
deepsignal
107
Stars
21
Forks
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Detecting methylation using signal-level features from Nanopore sequencing reads
bambu
164
Stars
21
Forks
Watchers
Reference-guided transcript discovery and quantification for long read RNA-Seq data
wub
61
Stars
10
Forks
Watchers
Tools and software library developed by the ONT Applications group
master_of_pores
86
Stars
15
Forks
Watchers
Nextflow pipeline for analysis of direct RNA Nanopore reads
RNA-Bloom
82
Stars
7
Forks
Watchers
:hibiscus: reference-free transcriptome assembly for short and long reads
DeepSimulator
112
Stars
40
Forks
Watchers
The first deep learning based Nanopore simulator which can simulate the process of Nanopore sequencing.