nanopore-sequencing topic

List nanopore-sequencing repositories

NanoSim

215
Stars
51
Forks
Watchers

Nanopore sequence read simulator

xpore

128
Stars
22
Forks
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Identification of differential RNA modifications from nanopore direct RNA sequencing

taiyaki

112
Stars
40
Forks
Watchers

Training models for basecalling Oxford Nanopore reads

mag

183
Stars
98
Forks
Watchers

Assembly and binning of metagenomes

deepsignal

107
Stars
21
Forks
Watchers

Detecting methylation using signal-level features from Nanopore sequencing reads

bambu

164
Stars
21
Forks
Watchers

Reference-guided transcript discovery and quantification for long read RNA-Seq data

wub

61
Stars
10
Forks
Watchers

Tools and software library developed by the ONT Applications group

master_of_pores

86
Stars
15
Forks
Watchers

Nextflow pipeline for analysis of direct RNA Nanopore reads

RNA-Bloom

82
Stars
7
Forks
Watchers

:hibiscus: reference-free transcriptome assembly for short and long reads

DeepSimulator

112
Stars
40
Forks
Watchers

The first deep learning based Nanopore simulator which can simulate the process of Nanopore sequencing.