BC Cancer Canada's Michael Smith Genome Sciences Centre
BC Cancer Canada's Michael Smith Genome Sciences Centre
abyss
:microscope: Assemble large genomes using short reads
NanoSim
Nanopore sequence read simulator
ntHash
Fast hash function for DNA/RNA sequences
arcs
🌈Scaffold genome sequence assemblies using linked or long read sequencing data
LINKS
⛓ Long Interval Nucleotide K-mer Scaffolder
ntEdit
✏️ Genome assembly polishing & SNV detection
mavis
Merging, Annotation, Validation, and Illustration of Structural variants
ntCard
Estimating k-mer coverage histogram of genomics data
RNA-Bloom
:hibiscus: reference-free transcriptome assembly for short and long reads
biobloom
Create Bloom filters for a given reference and then use it to categorize sequences