BC Cancer Canada's Michael Smith Genome Sciences Centre

Results 33 repositories owned by BC Cancer Canada's Michael Smith Genome Sciences Centre

abyss

300
Stars
100
Forks
Watchers

:microscope: Assemble large genomes using short reads

NanoSim

215
Stars
51
Forks
Watchers

Nanopore sequence read simulator

ntHash

91
Stars
13
Forks
Watchers

Fast hash function for DNA/RNA sequences

arcs

90
Stars
16
Forks
Watchers

🌈Scaffold genome sequence assemblies using linked or long read sequencing data

LINKS

70
Stars
15
Forks
Watchers

⛓ Long Interval Nucleotide K-mer Scaffolder

ntEdit

61
Stars
9
Forks
Watchers

✏️ Genome assembly polishing & SNV detection

mavis

72
Stars
13
Forks
Watchers

Merging, Annotation, Validation, and Illustration of Structural variants

ntCard

76
Stars
9
Forks
Watchers

Estimating k-mer coverage histogram of genomics data

RNA-Bloom

82
Stars
7
Forks
Watchers

:hibiscus: reference-free transcriptome assembly for short and long reads

biobloom

73
Stars
15
Forks
Watchers

Create Bloom filters for a given reference and then use it to categorize sequences