transcriptomics topic

starfish: unified pipelines for image-based transcriptomics

spacetx

Differential expression analysis for single-cell RNA-seq data.

theislab

R package for analyzing single-cell RNA-seq data

hms-dbmi

Annotated data.

scverse

R/shiny interface for interactive visualization of data in SummarizedExperiment objects

iSEE

Hierarchical, iterative clustering for analysis of transcriptomics data in R

AllenInstitute

A list of web-based interactive biological data visualizations.

keller-mark

Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail

federicomarini

HMM-integrated Bayesian approach for detecting CNV and LOH events from single-cell RNA-seq data

JEFworks-Lab

just annotate it, dammit!

dib-lab