scverse

Results 22 repositories owned by scverse

scanpy

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Single-cell analysis in Python. Scales to >1M cells.

scvi-tools

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342
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Deep probabilistic analysis of single-cell and spatial omics data

muon

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muon is a multimodal omics Python framework

scirpy

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A scanpy extension to analyse single-cell TCR and BCR data.

cookiecutter-scverse

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8
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Cookiecutter template for scverse

mudata

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Multimodal Data (.h5mu) implementation for Python

scanpy-tutorials

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Scanpy Tutorials.

scanpy_usage

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Scanpy use cases.