|Stars| |PyPI| |PyPIDownloadsTotal| |PyPIDownloadsMonth| |Conda| |Docs| |Build Status| |Coverage|

.. |Stars| image:: https://img.shields.io/github/stars/scverse/anndata?logo=GitHub&color=yellow :target: https://github.com/scverse/anndata/stargazers .. |PyPI| image:: https://img.shields.io/pypi/v/anndata.svg :target: https://pypi.org/project/anndata .. |PyPIDownloadsTotal| image:: https://pepy.tech/badge/anndata :target: https://pepy.tech/project/anndata .. |PyPIDownloadsMonth| image:: https://img.shields.io/pypi/dm/scanpy?logo=PyPI&color=blue :target: https://pypi.org/project/anndata .. |Conda| image:: https://img.shields.io/conda/vn/conda-forge/anndata.svg :target: https://anaconda.org/conda-forge/anndata .. |Docs| image:: https://readthedocs.com/projects/icb-anndata/badge/?version=latest :target: https://anndata.readthedocs.io .. |Build Status| image:: https://dev.azure.com/scverse/anndata/_apis/build/status/scverse.anndata?branchName=master :target: https://dev.azure.com/scverse/anndata/_build .. |Coverage| image:: https://codecov.io/gh/scverse/anndata/branch/master/graph/badge.svg?token=IN1mJN1Wi8 :target: https://codecov.io/gh/scverse/anndata

anndata - Annotated data

anndata is a Python package for handling annotated data matrices in memory and on disk, positioned between pandas and xarray. anndata offers a broad range of computationally efficient features including, among others, sparse data support, lazy operations, and a PyTorch interface.

• Read the documentation <https://anndata.readthedocs.io>_.
• Ask questions on the scverse Discourse <https://discourse.scverse.org>_.
• Install via pip install anndata or conda install anndata -c conda-forge.

.. would be nice to have the schema also on GitHub, but it’s much too wide there, hence need to duplicate description .. GitHub doesn’t plan to resolve scaling images: https://github.com/github/markup/issues/295