bioconductor-package topic

List bioconductor-package repositories

SC3

116
Stars
55
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A tool for the unsupervised clustering of cells from single cell RNA-Seq experiments

GeneTonic

75
Stars
8
Forks
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Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail

scmap

88
Stars
11
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A tool for unsupervised projection of single cell RNA-seq data

MultiAssayExperiment

67
Stars
32
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Bioconductor package for management of multi-assay data

BASiCS

82
Stars
16
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BASiCS: Bayesian Analysis of Single-Cell Sequencing Data. This is an unstable experimental version. Please see http://bioconductor.org/packages/BASiCS/ for the official release version

curatedMetagenomicData

121
Stars
27
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Curated Metagenomic Data of the Human Microbiome

SingleCellExperiment

62
Stars
18
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Clone of the Bioconductor repository for the SingleCellExperiment package, see https://bioconductor.org/packages/devel/bioc/html/SingleCellExperiment.html for the official development version.

dorothea

121
Stars
25
Forks
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R package to access DoRothEA's regulons

PureCN

120
Stars
31
Forks
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Copy number calling and variant classification using targeted short read sequencing

BiocParallel

63
Stars
29
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Bioconductor facilities for parallel evaluation