cancer topic

Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs

tariqdaouda

Detect and visualize target mutations by scanning FastQ files directly

OpenGene

A community-maintained repository of cancer clinical knowledge bases and databases focused on cancer variants.

seandavi

Building classifiers using cancer transcriptomes across 33 different cancer-types

greenelab

Code for the Nature Scientific Reports paper "Pathologist-level classification of histologic patterns on resected lung adenocarcinoma slides with deep neural networks." A sliding window framework for...

BMIRDS

Cancer Imaging Phenomics Toolkit (CaPTk) is a software platform to perform image analysis and predictive modeling tasks. Documentation: https://cbica.github.io/CaPTk

CBICA

P-NET, Biologically informed deep neural network for prostate cancer classification and discovery

marakeby

This project is all about a Machine Learning based Medical Test web app which makes predictions about various diseases using the concept of machine learning.

shobhitsrivastava-ds

Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

nf-core

Fast and accurate gene fusion detection from RNA-Seq data

suhrig