ngs topic

List ngs repositories

mapDamage

40
Stars
10
Forks
Watchers

mapDamage: tracking and quantifying damage patterns in ancient DNA sequences

bamtocov

58
Stars
6
Forks
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🏔 coverage extraction from BAM/CRAM files, supporting targets 📊  

atropos

118
Stars
14
Forks
Watchers

An NGS read trimming tool that is specific, sensitive, and speedy. (production)

bac-ngs-book

24
Stars
29
Forks
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病原微生物高通量测序数据分析笔记

Circle-Map

60
Stars
18
Forks
Watchers

A method for circular DNA detection based on probabilistic mapping of ultrashort reads

fastp

1.8k
Stars
333
Forks
Watchers

An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

cloud-pipeline

143
Stars
58
Forks
Watchers

Cloud agnostic genomics analysis, scientific computation and storage platform

galaxy

1.3k
Stars
966
Forks
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Data intensive science for everyone.

rvtests

126
Stars
40
Forks
Watchers

Rare variant test software for next generation sequencing data

AnnotSV

194
Stars
36
Forks
Watchers

Annotation and Ranking of Structural Variation