ngs topic
mapDamage
mapDamage: tracking and quantifying damage patterns in ancient DNA sequences
bamtocov
🏔 coverage extraction from BAM/CRAM files, supporting targets 📊
atropos
An NGS read trimming tool that is specific, sensitive, and speedy. (production)
Circle-Map
A method for circular DNA detection based on probabilistic mapping of ultrashort reads
fastp
An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)
cloud-pipeline
Cloud agnostic genomics analysis, scientific computation and storage platform
galaxy
Data intensive science for everyone.
rvtests
Rare variant test software for next generation sequencing data