transcriptome topic
isONclust
De novo clustering of long transcript reads into genes
NanoSim
Nanopore sequence read simulator
pancancer
Building classifiers using cancer transcriptomes across 33 different cancer-types
scCATCH
Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data
salmon
🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment
get_homologues
GET_HOMOLOGUES: a versatile software package for pan-genome analysis
GeneTonic
Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail
STARTapp
The START App: R Shiny Transcriptome Analysis Resource Tool
mavis
Merging, Annotation, Validation, and Illustration of Structural variants
TALON
Technology agnostic long read analysis pipeline for transcriptomes