Dr. FAN, Xiaohui
Dr. FAN, Xiaohui
scCATCH
Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data
scDeepSort
Cell-type Annotation for Single-cell Transcriptomics using Deep Learning with a Weighted Graph Neural Network
bulk2space
a spatial deconvolution method based on deep learning frameworks, which converts bulk transcriptomes into spatially resolved single-cell expression profiles
CellTalkDB
A manually curated database of literature-supported ligand-receptor interactions in human and mouse
SpaTalk
Knowledge-graph-based cell-cell communication inference for spatially resolved transcriptomic data
scSpace
an integrative algorithm to distinguish spatially variable cell subclusters by reconstructing cells onto a pseudo space with spatial transcriptome references
scCATCH_performance_comparison
The source code and results of performance comparison on the detail of the process among scCATCH, CellAssign, Garnett, SingleR, scMap and CHETAH, and CellMatch database
scRank
A computational method to rank and infer drug-responsive cell population towards in-silico drug perturbation using a target-perturbed gene regulatory network (tpGRN) for single-cell transcriptomic dat...