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mixcr
312
Stars
78
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MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.
salmon
739
Stars
160
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🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment
alevin-fry
153
Stars
15
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🐟 🔬🦀 alevin-fry is an efficient and flexible tool for processing single-cell sequencing data, currently focused on single-cell transcriptomics and feature barcoding.
CITE-seq-Count
74
Stars
43
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A tool that allows to get UMI counts from a single cell protein assay
fastq_utils
34
Stars
14
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Validation and manipulation of FASTQ files, scRNA-seq barcode pre-processing and UMI quantification.
idk
27
Stars
6
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The IDK (Industrial Development Kit) library!
cirrocumulus
65
Stars
10
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Bring your single-cell data to life