marker-genes topic
scCATCH
Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data
clustifyr
Infer cell types in scRNA-seq data using bulk RNA-seq or gene sets
COSGR
Accurate and fast cell marker gene identification with COSG
NSForest
A machine learning method for the discovery of the minimum marker gene combinations for cell type identification from single-cell RNA sequencing
scGate
marker-based purification of cell types from single-cell RNA-seq datasets
CyteType
Multi-agent LLM driven cell type annotation for single-cell RNA-Seq data
CyteTypeR
Multi-agent LLM driven cell type annotation for single-cell RNA-Seq data