pacbio-data topic

List pacbio-data repositories

cuteSV

233
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33
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Long read based human genomic structural variation detection with cuteSV

arcs

90
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16
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🌈Scaffold genome sequence assemblies using linked or long read sequencing data

LRSDAY

32
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9
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LRSDAY: Long-read Sequencing Data Analysis for Yeasts

rMETL

16
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4
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rMETL - realignment-based Mobile Element insertion detection Tool for Long read

HiPhase

62
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4
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Small variant, structural variant, and short tandem repeat phasing tool for PacBio HiFi reads

SpecHLA

35
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9
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SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, and -DRB1 genes. Also, it supports both short- and long-read da...