PacBio
PacBio
IsoSeq
Iso-Seq - Scalable De Novo Isoform Discovery from Single-Molecule PacBio Reads
FALCON
FALCON: experimental PacBio diploid assembler -- Out-of-date -- Please use a binary release: https://github.com/PacificBiosciences/FALCON_unzip/wiki/Binaries
ccs
CCS: Generate Highly Accurate Single-Molecule Consensus Reads (HiFi Reads)
bam2fastx
Converting and demultiplexing of PacBio BAM files into gzipped fasta and fastq files.
barcoding
Lima - Demultiplex Barcoded PacBio Samples
FALCON-integrate
Mostly deprecated. See https://github.com/PacificBiosciences/FALCON_unzip/wiki/Binaries
FALCON_unzip
Making diploid assembly becomes common practice for genomic study