haplotype topic

Segmented HAPlotype Estimation and Imputation Tool

odelaneau

SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, and -DRB1 genes. Also, it supports both short- and long-read da...

deepomicslab

A tool to visualize the haplotype pattern and various information in excel.

fengcong3

HapHiC: a fast, reference-independent, allele-aware scaffolding tool based on Hi-C data

zengxiaofei

Using de-novo assembly and read-phasing to assemble reference-free diploid genomes

SAMtoBAM

snp.plotter is an R package that creates publishable-quality plots of p-values using single SNP and/or haplotype data.

cannin