short-tandem-repeats topic

List short-tandem-repeats repositories

strspy

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STRspy: a novel alignment and quantification-based state-of-the-art method, short tandem repeat (STR) detection calling tool designed specifically for long-read sequencing reads such as from Oxford na...

STRling

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Detect novel (and reference) STR expansions from short-read data

HiPhase

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Small variant, structural variant, and short tandem repeat phasing tool for PacBio HiFi reads

NanoRepeat

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NanoRepeat: fast and accurate analysis of Short Tandem Repeats (STRs) from Oxford Nanopore sequencing data