short-tandem-repeats topic
List
short-tandem-repeats repositories
strspy
15
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5
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STRspy: a novel alignment and quantification-based state-of-the-art method, short tandem repeat (STR) detection calling tool designed specifically for long-read sequencing reads such as from Oxford na...
STRling
60
Stars
9
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Detect novel (and reference) STR expansions from short-read data
HiPhase
55
Stars
5
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Small variant, structural variant, and short tandem repeat phasing tool for PacBio HiFi reads
NanoRepeat
15
Stars
1
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NanoRepeat: fast and accurate analysis of Short Tandem Repeats (STRs) from Oxford Nanopore sequencing data