scrna-seq topic

Doublet detection in single-cell RNA-seq data.

JonathanShor

An interactive explorer for single-cell transcriptomics data

chanzuckerberg

Single cell trajectory detection

dpeerlab

Deep probabilistic analysis of single-cell and spatial omics data

scverse

Fast, sensitive and accurate integration of single-cell data with Harmony

immunogenomics

Reference mapping for single-cell genomics

theislab

Single (i) Cell R package (iCellR) is an interactive R package to work with high-throughput single cell sequencing technologies (i.e scRNA-seq, scVDJ-seq, scATAC-seq, CITE-Seq and Spatial Transcriptom...

rezakj

Inclusive model of expression dynamics with conventional or metabolic labeling based scRNA-seq / multiomics, vector field reconstruction and differential geometry analyses

aristoteleo

Single-cell Transcriptome and Regulome Analysis Pipeline

liulab-dfci

🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment

COMBINE-lab