ngs topic

List ngs repositories

sequana

140
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27
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Sequana: a set of Snakemake NGS pipelines

training-material

296
Stars
850
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A collection of Galaxy-related training material

bioconvert

354
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42
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Bioconvert is a collaborative project to facilitate the interconversion of life science data from one format to another.

snakepipes

372
Stars
85
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Customizable workflows based on snakemake and python for the analysis of NGS data

juicer

393
Stars
181
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A One-Click System for Analyzing Loop-Resolution Hi-C Experiments

awesome-omics

541
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63
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A collection of awesome things regarding all omics.

fgbio

304
Stars
68
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Tools for working with genomic and high throughput sequencing data.

scde

171
Stars
64
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R package for analyzing single-cell RNA-seq data

CRISPResso

129
Stars
55
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Software pipeline for the analysis of CRISPR-Cas9 genome editing outcomes from sequencing data