single-cell-rna-seq topic
diffxpy
Differential expression analysis for single-cell RNA-seq data.
MuSiC
Multi-subject Single Cell Deconvolution
SC3
A tool for the unsupervised clustering of cells from single cell RNA-Seq experiments
OrchestratingSingleCellAnalysis
Content for the OSCA Book.
dropEst
Pipeline for initial analysis of droplet-based single-cell RNA-seq data
dynverse
A set of tools supporting the development, execution, and benchmarking of trajectory inference methods. 🌍
tidyseurat
Seurat meets tidyverse. The best of both worlds.
swne
Similarity Weighted Nonnegative Embedding (SWNE), a method for visualizing high dimensional datasets