Stefano Mangiola

Results 9 repositories owned by Stefano Mangiola

tidyHeatmap

282
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21
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Draw heatmap simply using a tidy data frame

tidybulk

161
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23
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Brings bulk and pseudobulk transcriptomics to the tidyverse

tidyseurat

143
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12
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Seurat meets tidyverse. The best of both worlds.

bioc_2020_tidytranscriptomics

27
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10
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Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap

nanny

30
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1
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A tidyverse suite for (pre-) machine-learning: cluster, PCA, permute, impute, rotate, redundancy, triangular, smart-subset, abundant and variable features.

tidySingleCellExperiment

34
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7
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Brings SingleCellExperiment objects to the tidyverse

tidygate

19
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3
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Label elements within user drawn gates

CuratedAtlasQueryR

77
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6
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Tidy R query API for the harmonised and curated CELLxGENE single-cell atlas.

tidySummarizedExperiment

19
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5
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Brings SummarizedExperiment to tidiverse with no side-effects