Stefano Mangiola
Stefano Mangiola
tidyHeatmap
Draw heatmap simply using a tidy data frame
tidybulk
Brings bulk and pseudobulk transcriptomics to the tidyverse
tidyseurat
Seurat meets tidyverse. The best of both worlds.
bioc_2020_tidytranscriptomics
Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap
nanny
A tidyverse suite for (pre-) machine-learning: cluster, PCA, permute, impute, rotate, redundancy, triangular, smart-subset, abundant and variable features.
tidySingleCellExperiment
Brings SingleCellExperiment objects to the tidyverse
tidygate
Label elements within user drawn gates
CuratedAtlasQueryR
Tidy R query API for the harmonised and curated CELLxGENE single-cell atlas.
tidySummarizedExperiment
Brings SummarizedExperiment to tidiverse with no side-effects