single-cell-rna-seq topic

HMM-integrated Bayesian approach for detecting CNV and LOH events from single-cell RNA-seq data

JEFworks-Lab

A BLAST-like toolkit for large-scale scRNA-seq data querying and annotation.

gao-lab

Deep Learning based cell composition analysis with Scaden.

KevinMenden

integrated RNA-seq Analysis Pipeline

nunofonseca

Infer cell types in scRNA-seq data using bulk RNA-seq or gene sets

rnabioco

A tool for unsupervised projection of single cell RNA-seq data

hemberg-lab

scDeepCluster for Single Cell RNA-seq data

ttgump

Accurate and robust imputation of scRNA-seq data

Vivianstats

Single-Cell Clustering Assessment Framework

SCCAF

A wrapper for the kallisto | bustools workflow for single-cell RNA-seq pre-processing

pachterlab