seurat topic

List seurat repositories

scCustomize

179
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19
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R package with collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.

NASQAR

29
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10
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NASQAR: A web-based platform for High-throughput sequencing data analysis and visualization

seuratv3wizard

32
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14
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A web-based interactive (wizard style) application to perform a guided single-cell RNA-seq data analysis and clustering based on Seurat v3

tidygate

19
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3
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Label elements within user drawn gates

cirrocumulus

71
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14
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Bring your single-cell data to life

MuDataSeurat

24
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10
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.h5mu files interface for Seurat

Seurat.utils

26
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6
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Various utility functions for Seurat single-cell analysis

scMiko

22
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6
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R package developed for single-cell RNA-seq analysis. It was designed using the Seurat framework, and offers existing and novel single-cell analytic work flows.

PieParty

16
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1
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represent each cell in UMAP plots as a pie chart