seurat topic
ARCoreInsideOutTrackingGearVr
Inside Out Positional Tracking (6DoF) for GearVR/Cardboard/Daydream using ARCore v1.6.0
scCATCH
Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data
tidyseurat
Seurat meets tidyverse. The best of both worlds.
cellxgene_VIP
Enables cellxgene to generate violin, stacked violin, stacked bar, heatmap, volcano, embedding, dot, track, density, 2D density, sankey and dual-gene plot in high-resolution SVG/PNG format. It also pe...
Interactive-3D-Plotting-in-Seurat-3.0.0
This repository contains R code, with which you can create 3D UMAP and tSNE plots of Seurat analyzed scRNAseq data
Seurat-to-RNA-Velocity
A guide to using a Seurat object in conjunction with RNA Velocity
SCpubr
Generate high quality, publication ready visualizations for single cell transcriptomics data.
SCP
An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.
ReductionWrappers
R wrappers to connect Python dimensional reduction tools and single cell data objects (Seurat, SingleCellExperiment, etc...)