multi-omics topic

List multi-omics repositories

muon

200
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28
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muon is a multimodal omics Python framework

MOFA2

277
Stars
49
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Multi-Omics Factor Analysis

OpenOmics

29
Stars
13
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A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.

mudata

68
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16
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Multimodal Data (.h5mu) implementation for Python

melonnpan

33
Stars
8
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Model-based Genomically Informed High-dimensional Predictor of Microbial Community Metabolic Profiles

maui

48
Stars
20
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Multi-omics Autoencoder Integration: Deep learning-based heterogenous data analysis toolkit

OmicsSuite.github.io

19
Stars
2
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OmicsSuite website for releasing new version.

babel

37
Stars
16
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Deep learning model for single-cell inference of multi-omic profiles from a single input modality.

timeOmics

23
Stars
6
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Time-Course Multi-Omics data integration

TIMEOR

17
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4
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TIMEOR: Trajectory Inference and Mechanism Exploration with Omics Data in R