deseq2 topic

List deseq2 repositories

tidybulk

161
Stars
23
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Brings bulk and pseudobulk transcriptomics to the tidyverse

tximport

131
Stars
33
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Transcript quantification import for modular pipelines

SARTools

102
Stars
65
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Statistical Analysis of RNA-Seq Tools

NASQAR

29
Stars
10
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NASQAR: A web-based platform for High-throughput sequencing data analysis and visualization

deseq2_or_edger

22
Stars
8
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DESeq2 or edgeR

differentialabundance

46
Stars
27
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Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq