sequence-alignments topic

Python library to facilitate genome assembly, annotation, and comparative genomics

tanghaibao

SeqAn's official repository.

seqan

C++ htslib/bwa-mem/fermi interface for interrogating sequence data

walaj

PyMod 3 - sequence similarity searches, multiple sequence/structure alignments, and homology modeling within PyMOL.

pymodproject

Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; available as a docker image

biocommons

Genome wide orthology inference and dNdS estimation

drostlab

Inference of couplings in proteins and RNAs from sequence variation

debbiemarkslab

TREDPARSE: HLI Short Tandem Repeat (STR) caller

humanlongevity

Solving Multiple Sequence Alignment (MSA) problems with multi-objective metaheuristics

benhid

BWT, FM-index and bits vector for analyzing DNA sequence data.

wafflespeanut