multiple-sequence-alignment topic

A tool for automated alignment trimming in large-scale phylogenetic analyses. Development version: 2.0

inab

Algorithm for ultra-scale multiple sequence alignments (3M protein sequences in 5 minutes and 24 GB of RAM)

refresh-bio

Mutual Information Tools for protein Sequence analysis in Julia

diegozea

abPOA: an SIMD-based C library for fast partial order alignment using adaptive band

yangao07

Implementation of Neural Distance Embeddings for Biological Sequences (NeuroSEED) in PyTorch (NeurIPS 2021)

gcorso

Scalable long read self-correction and assembly polishing with multiple sequence alignment

morispi

🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations

thekaplanlab

Graph based multi genome aligner

jasperlinthorst

TideHunter: efficient and sensitive tandem repeat detection from noisy long reads using seed-and-chain

yangao07

Fast and accurate protein structure prediction

psipred