biocommons

Results 5 repositories owned by biocommons

hgvs

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Python library to parse, format, validate, normalize, and map sequence variants. `pip install hgvs`

uta

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Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; available as a docker image

biocommons.seqrepo

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non-redundant, compressed, journalled, file-based storage for biological sequences

eutils

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simplified searching, fetching, and parsing records from NCBI using their E-utilities interface

bioutils

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provides common tools and lookup tables used primarily by the hgvs and uta packages