genome-sequencing topic

List genome-sequencing repositories

awesome-sequencing-tech-papers

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A collection of publications on comparison of high-throughput sequencing technologies.

jcvi

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Python library to facilitate genome assembly, annotation, and comparative genomics

kubegene

191
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KubeGene - A turn-key Genome Sequencing workflow management framework

pyGeno

308
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Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs

benchmarking-tools

182
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Repository for the GA4GH Benchmarking Team work developing standardized benchmarking methods for germline small variant calls

viral-ngs

187
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Viral genomics analysis pipelines

DNA-seq-analysis

136
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DNA sequencing analysis notes from Ming Tang

GenomeGraphs.jl

64
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A modern genomics framework for julia

TitanCNA

92
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39
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Analysis of subclonal copy number alterations (CNA) and loss of heterozygosity (LOH) in cancer

helen

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H.E.L.E.N. (Homopolymer Encoded Long-read Error-corrector for Nanopore)