plasmid topic

a JavaScript DNA, RNA, and protein sequence viewer

Lattice-Automation

Software for prediction of plasmid sequences in metagenomic assemblies

smaegol

Predict plasmids from uncorrected long read data

andrewjpage

Insertion sequences (Insertion Element) [https://en.wikipedia.org/wiki/Insertion_sequence] collected from ISfinder (https://isfinder.biotoul.fr/)

thanhleviet

repository-based plasmid design

Lattice-Automation

PLSDB pipeline to collect bacterial plasmids from NCBI

CCB-SB

This is the codebase for Recycler, described in our manuscript: https://academic.oup.com/bioinformatics/article/33/4/475/2623362, by Roye Rozov, Aya Brown Kav, David Bogumil, Naama Shterzer, Eran Halp...

Shamir-Lab

PlasmidID is a mapping-based, assembly-assisted plasmid identification tool that analyzes and gives graphic solution for plasmid identification.

BU-ISCIII

An accurate and sensitive bacterial plasmid identification tool based on deep machine-learning of shared k-mers and genomic features.

nekokoe

code repo for mobileOG-db

clb21565