ngs-analysis topic
NGS-variants-training
GitHub for the SIB courses NGS - Genome variant analysis
bioframe
Genomic interval operations on Pandas DataFrames
rnaseq-pipeline
RNA-seq pipeline for raw sequence alignment and transcript/gene quantification.
STing
Ultrafast sequence typing and gene detection from NGS raw reads
scripts
Metagenomic pipeline and other general scripts used in the lab.
RNA-seq-tutorial-for-gene-differential-expression-analysis
This tutorial is created for educational purpose
MSPC
Using combined evidence from replicates to evaluate ChIP-seq peaks
CSBB-Shiny
Computational Suite for Bioinformaticians and Biologists (CSBB) is a RShiny application developed with an intention to empower researchers from wet and dry lab to perform downstream Bioinformatics ana...
plasmidID
PlasmidID is a mapping-based, assembly-assisted plasmid identification tool that analyzes and gives graphic solution for plasmid identification.