kallisto topic

Near-optimal RNA-Seq quantification

pachterlab

A single-cell RNAseq pipeline for 10X genomics data

nf-core

A Snakemake workflow for differential expression analysis of RNA-seq data with Kallisto and Sleuth.

snakemake-workflows

A wrapper for the kallisto | bustools workflow for single-cell RNA-seq pre-processing

pachterlab

kallisto | bustools workflow for pre-processing single-cell RNA-seq data

pachterlab

A guide to using a Seurat object in conjunction with RNA Velocity

basilkhuder

A nextflow implementation of Kallisto & Sleuth RNA-Seq Tools

cbcrg