kallisto topic
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kallisto repositories
kallisto
624
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169
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Near-optimal RNA-Seq quantification
scrnaseq
209
Stars
166
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A single-cell RNAseq pipeline for 10X genomics data
rna-seq-kallisto-sleuth
63
Stars
43
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A Snakemake workflow for differential expression analysis of RNA-seq data with Kallisto and Sleuth.
kb_python
141
Stars
22
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A wrapper for the kallisto | bustools workflow for single-cell RNA-seq pre-processing
kallistobustools
110
Stars
30
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kallisto | bustools workflow for pre-processing single-cell RNA-seq data
Seurat-to-RNA-Velocity
126
Stars
26
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A guide to using a Seurat object in conjunction with RNA Velocity
kallisto-nf
21
Stars
20
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A nextflow implementation of Kallisto & Sleuth RNA-Seq Tools