kmer topic

Generate unique KMERs for every contig in a FASTA file

OpenGene

🎯 Generate DNA sequences with specified amino acid, codon, and k-mer frequencies

IQTLabs

k-mer similarity analysis pipeline

nf-core

Bioinformatics 101 tool for counting unique k-length substrings in DNA

suchapalaver

Ultrafast sequence typing and gene detection from NGS raw reads

jordanlab

Classify sequencing reads using MinHash.

edawson

Fast k-mer based tool for multi locus sequence typing (MLST)

jordanlab

fast and comprehensive k-mer counting package

slowikj

Generate kmers/minimizers/hashes/MinHash signatures, including with multiple kmer sizes.

edawson

Fast and space-efficient taxonomic classification of long reads

JensUweUlrich