minhash topic

List minhash repositories

flajolet

39
Stars
3
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Probabilistic data structures for OCaml

bloom-filters

350
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38
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JS implementation of probabilistic data structures: Bloom Filter (and its derived), HyperLogLog, Count-Min Sketch, Top-K and MinHash

datasketch

2.4k
Stars
290
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MinHash, LSH, LSH Forest, Weighted MinHash, HyperLogLog, HyperLogLog++, LSH Ensemble and HNSW

sketchy

147
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18
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Sketching Algorithms for Clojure (bloom filter, min-hash, hyper-loglog, count-min sketch)

sketch

150
Stars
14
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C++ Implementations of sketch data structures with SIMD Parallelism, including Python bindings

LSH

274
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77
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Locality Sensitive Hashing using MinHash in Python/Cython to detect near duplicate text documents

sourmash

441
Stars
76
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Quickly search, compare, and analyze genomic and metagenomic data sets.

elasticsearch-minhash

60
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14
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Elasticsearch plugin for b-bit minhash algorism

consimilo

62
Stars
4
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A Clojure library for querying large data-sets on similarity

groot

63
Stars
6
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A resistome profiler for Graphing Resistance Out Of meTagenomes