kmer-counting topic

List kmer-counting repositories
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kmer-counter

24
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5
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Count kmers with a more efficient (faster) hash table

kmermaid

19
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11
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k-mer similarity analysis pipeline

krust

30
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5
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Bioinformatics 101 tool for counting unique k-length substrings in DNA

seqR

16
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1
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fast and comprehensive k-mer counting package

Discount

17
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1
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Very large scale k-mer counting and analysis on Apache Spark.

kmertools

25
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2
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kmer based feature extraction tool for bioinformatics, metagenomics, AI/ML and more

ELBA

15
Stars
9
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Parallel String Graph Construction, Transitive Reduction, and Contig Generation for De Novo Genome Assembly