genome-graph topic
mccortex
De novo genome assembly and multisample variant calling
vg
tools for working with genome variation graphs
minigraph
Sequence-to-graph mapper and graph generator
gfatools
Tools for manipulating sequence graphs in the GFA and rGFA formats
GenomeGraphs.jl
A modern genomics framework for julia
gramtools
Genome inference from a population reference graph
MoMI-G
Modular Multi-scale Integrated Genome Graph Browser
plot-VCF
visual analysis of your VCF files
svaha2
Linear-time, low-memory construction of variation graphs
danbing-tk
Toolkit for VNTR genotyping and repeat-pan genome graph construction