tandem-repeats topic
List
tandem-repeats repositories
TideHunter
24
Stars
4
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TideHunter: efficient and sensitive tandem repeat detection from noisy long reads using seed-and-chain
straglr
47
Stars
8
Forks
Watchers
Tandem repeat expansion detection or genotyping from long-read alignments
nPoRe
16
Stars
0
Forks
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nPoRe: n-Polymer Realigner for improved pileup-based variant calling
danbing-tk
20
Stars
3
Forks
Watchers
Toolkit for VNTR genotyping and repeat-pan genome graph construction
TideHunter
17
Stars
2
Forks
Watchers
TideHunter: efficient and sensitive tandem repeat detection from noisy long reads using seed-and-chain