genome-browser topic

List genome-browser repositories

pyGeno

308
Stars
52
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Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs

jbrowse

459
Stars
199
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JBrowse 1, a full-featured genome browser built with JavaScript and HTML5. For JBrowse 2, see https://github.com/GMOD/jbrowse-components.

bacannot

96
Stars
9
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Generic but comprehensive pipeline for prokaryotic genome annotation and interrogation with interactive reports and shiny app.

usher

117
Stars
40
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Ultrafast Sample Placement on Existing Trees

MoMI-G

85
Stars
6
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Modular Multi-scale Integrated Genome Graph Browser

millefy

24
Stars
2
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Millefy: Genome browser-like visualization of single-cell RNA-seq dataset

jbrowse-jupyter

23
Stars
3
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A python package for showing JBrowse views

gw

143
Stars
5
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Genome browser and variant annotation

cgview-js

22
Stars
2
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CGView.js creates interactive circular and linear genome maps.