alternative-splicing topic

List alternative-splicing repositories

altanalyze

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AltAnalyze is a multi-functional and easy-to-use software package for automated single-cell and bulk gene and splicing analyses. Easy-to-use precompiled graphical user-interface versions available fro...

Whippet.jl

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Lightweight and Fast; RNA-seq quantification at the event-level

brie

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BRIE: Bayesian Regression for Isoform Estimate in Single Cells

psichomics

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Interactive R package to quantify, analyse and visualise alternative splicing

rnasplice

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rnasplice is a bioinformatics pipeline for RNA-seq alternative splicing analysis

Sierra

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Discover differential transcript usage from polyA-captured single cell RNA-seq data

PEGASAS

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Pathway Enrichment-Guided Activity Study of Alternative Splicing (PEGASAS)