differential-gene-expression topic

List differential-gene-expression repositories
trafficstars

pipeline-transcriptome-de

105
Stars
25
Forks
Watchers

Pipeline for differential gene expression (DGE) and differential transcript usage (DTU) analysis using long reads

psichomics

37
Stars
11
Forks
Watchers

Interactive R package to quantify, analyse and visualise alternative splicing

ASAP

23
Stars
10
Forks
Watchers

ASAP : Automated Single-cell Analysis Pipeline

workshop-RNAseq

32
Stars
14
Forks
Watchers

Workshop • Analysis of RNA-seq data

iDEA

28
Stars
11
Forks
Watchers

Differential expression (DE); gene set Enrichment Analysis (GSEA); single cell RNAseq studies (scRNAseq)

DEA.R

17
Stars
7
Forks
Watchers

Script to automate differential expression analysis using DESeq2, edgeR or limma-voom