differential-gene-expression topic
pipeline-transcriptome-de
Pipeline for differential gene expression (DGE) and differential transcript usage (DTU) analysis using long reads
psichomics
Interactive R package to quantify, analyse and visualise alternative splicing
ASAP
ASAP : Automated Single-cell Analysis Pipeline
workshop-RNAseq
Workshop • Analysis of RNA-seq data
glmmSeq
Gene-level general linear mixed model
iDEA
Differential expression (DE); gene set Enrichment Analysis (GSEA); single cell RNAseq studies (scRNAseq)
DEA.R
Script to automate differential expression analysis using DESeq2, edgeR or limma-voom
RNASeqR
📊 An R package of RNA-seq workflow