pyGeno

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feghalya

add indel

1

Some modification to manage indel as a specific case of SequenceInsertion or SequenceDeletion.

ericloud

Cannot install pyGeno successfully

1

I tried to install pyGeno in python2.7 ubuntu16.04.10，but Can't install successfully. The error message is as follows： Traceback (most recent call last): File "", line 1, in File "/home/dongl/.local/lib/python2.7/site-packages/pyGeno/__init__.py", line...

lotus-devo

- Updated savers to use bulkSave - Still work to be done to confirm links perform the same - Noticed SNPs has error on import in bootstrap, commented out as...

cw00dw0rd

GenomicLink (edges) does not work

1

Linking between different object is not happening

tariqdaouda

Untouched, should remove Casava and TopHat

tariqdaouda

Connecting the data from arangodb to the logic in pyGeno.

tariqdaouda

We need more tests

tariqdaouda

Queries with "ORs" have to be integrated

tariqdaouda

Make sure everything is imported the right way - 0 based vs 1 based (ensembl) - Selenocysteines

tariqdaouda