proteomics topic

A Python API for the RCSB Protein Data Bank (PDB)

williamgilpin

Various teaching material

lgatto

Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs

tariqdaouda

Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm

lightdock

A collection of Galaxy-related training material

galaxyproject

The codebase of the OpenMS project

OpenMS

A modular, python-based framework for mass spectrometry. Powered by nbdev.

MannLabs

Algorithm for ultra-scale multiple sequence alignments (3M protein sequences in 5 minutes and 24 GB of RAM)

refresh-bio

A cross-platform Graphical User Interface (GUI) for running MSFragger and Philosopher - powered pipeline for comprehensive analysis of shotgun proteomics data

Nesvilab

Base Classes and Functions for Mass Spectrometry and Proteomics

lgatto