proteomics topic
List
proteomics repositories
pypdb
300
Stars
77
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A Python API for the RCSB Protein Data Bank (PDB)
TeachingMaterial
179
Stars
81
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Various teaching material
pyGeno
308
Stars
52
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Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs
lightdock
281
Stars
36
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Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm
training-material
296
Stars
850
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A collection of Galaxy-related training material
OpenMS
459
Stars
307
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The codebase of the OpenMS project
alphapept
160
Stars
29
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A modular, python-based framework for mass spectrometry. Powered by nbdev.
FAMSA
133
Stars
26
Forks
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Algorithm for ultra-scale multiple sequence alignments (3M protein sequences in 5 minutes and 24 GB of RAM)
FragPipe
165
Stars
35
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A cross-platform Graphical User Interface (GUI) for running MSFragger and Philosopher - powered pipeline for comprehensive analysis of shotgun proteomics data
MSnbase
120
Stars
50
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Watchers
Base Classes and Functions for Mass Spectrometry and Proteomics