vcf topic

List vcf repositories

eurorack

30
Stars
8
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Eurorack Module Designs, often based on popular designs but modified to be even more...escalative.

VariantSpark

138
Stars
45
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machine learning for genomic variants

bioSyntax

248
Stars
30
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Syntax highlighting for computational biology

SURVIVOR

333
Stars
45
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Toolset for SV simulation, comparison and filtering

hail

944
Stars
238
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Cloud-native genomic dataframes and batch computing

peddy

129
Stars
39
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genotype :: ped correspondence check, ancestry check, sex check. directly, quickly on VCF

vcf2phylip

265
Stars
83
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Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis

pyGeno

308
Stars
52
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Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs

htslib

778
Stars
448
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C library for high-throughput sequencing data formats

htsjdk

274
Stars
244
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A Java API for high-throughput sequencing data (HTS) formats.